IL_9HAI_029

3D structure

PDB id

9HAI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pooled 50S subunit C-CP_L2-L28 precursor states supplemented with Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

3.01 Å

Loop

Sequence

GGGAAAC*GGAAGAUGUAACGGGGC

Length

24 nucleotides

Bulged bases

9HAI|1|A|A|1127, 9HAI|1|A|U|1130, 9HAI|1|A|A|1133, 9HAI|1|A|A|1134

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HAI|1|A|G|1024
9HAI|1|A|G|1025
9HAI|1|A|G|1026
9HAI|1|A|A|1027
9HAI|1|A|A|1028
9HAI|1|A|A|1029
9HAI|1|A|C|1030
*
9HAI|1|A|G|1124
9HAI|1|A|G|1125
9HAI|1|A|A|1126
9HAI|1|A|A|1127
9HAI|1|A|G|1128
9HAI|1|A|A|1129
9HAI|1|A|U|1130
9HAI|1|A|G|1131
9HAI|1|A|U|1132
9HAI|1|A|A|1133
9HAI|1|A|A|1134
9HAI|1|A|C|1135
9HAI|1|A|G|1136
9HAI|1|A|G|1137
9HAI|1|A|G|1138
9HAI|1|A|G|1139
9HAI|1|A|C|1140

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain J

Large ribosomal subunit protein uL13