IL_9HFN_018

3D structure

PDB id

9HFN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translation-initiation state of human mitochondrial ribosome small subunit (State E)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UAAAACU*ACACAAA

Length

14 nucleotides

Bulged bases

9HFN|1|A|C|1011

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HFN|1|A|U|974
9HFN|1|A|A|975
9HFN|1|A|A|976
9HFN|1|A|A|977
9HFN|1|A|A|978
9HFN|1|A|C|979
9HFN|1|A|U|980
*
9HFN|1|A|A|1008
9HFN|1|A|C|1009
9HFN|1|A|A|1010
9HFN|1|A|C|1011
9HFN|1|A|A|1012
9HFN|1|A|A|1013
9HFN|1|A|A|1014

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain E

28S ribosomal protein S6, mitochondrial

Chain I

28S ribosomal protein S11, mitochondrial

Chain P

28S ribosomal protein S18c, mitochondrial

Chain Q

28S ribosomal protein S21, mitochondrial