IL_9HFN_027

3D structure

PDB id

9HFN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translation-initiation state of human mitochondrial ribosome small subunit (State E)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

AUAUC*GCCCU

Length

10 nucleotides

Bulged bases

9HFN|1|A|U|1187, 9HFN|1|A|A|1188

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HFN|1|A|A|1186
9HFN|1|A|U|1187
9HFN|1|A|A|1188
9HFN|1|A|U|1189
9HFN|1|A|C|1190
*
9HFN|1|A|G|1464
9HFN|1|A|C|1465
9HFN|1|A|C|1466
9HFN|1|A|C|1467
9HFN|1|A|U|1468

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain 2

Small ribosomal subunit protein mS37

Chain F

28S ribosomal protein S7, mitochondrial

Chain G

28S ribosomal protein S9, mitochondrial