IL_9HFN_029

3D structure

PDB id

9HFN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translation-initiation state of human mitochondrial ribosome small subunit (State E)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CUUGCUCAG*CCCAUG

Length

15 nucleotides

Bulged bases

9HFN|1|A|C|1250, 9HFN|1|A|C|1342

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HFN|1|A|C|1244
9HFN|1|A|U|1245
9HFN|1|A|U|1246
9HFN|1|A|G|1247
9HFN|1|A|C|1248
9HFN|1|A|U|1249
9HFN|1|A|C|1250
9HFN|1|A|A|1251
9HFN|1|A|G|1252
*
9HFN|1|A|C|1340
9HFN|1|A|C|1341
9HFN|1|A|C|1342
9HFN|1|A|A|1343
9HFN|1|A|U|1344
9HFN|1|A|G|1345

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain D

28S ribosomal protein S5, mitochondrial

Chain K

28S ribosomal protein S14, mitochondrial

Chain Z

28S ribosomal protein S33, mitochondrial