IL_9HFO_020

3D structure

PDB id

9HFO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translation-initiation state of human mitochondrial ribosome small subunit (State G)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UUUUA*UGAACA

Length

11 nucleotides

Bulged bases

9HFO|1|A|A|1047, 9HFO|1|A|C|1048

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HFO|1|A|U|946
9HFO|1|A|U|947
9HFO|1|A|U|948
9HFO|1|A|U|949
9HFO|1|A|A|950
*
9HFO|1|A|U|1044
9HFO|1|A|G|1045
9HFO|1|A|A|1046
9HFO|1|A|A|1047
9HFO|1|A|C|1048
9HFO|1|A|A|1049

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain J

28S ribosomal protein S12, mitochondrial

Chain L

28S ribosomal protein S15, mitochondrial

Chain N

28S ribosomal protein S17, mitochondrial

Chain T

28S ribosomal protein S25, mitochondrial