IL_9HMW_017
3D structure
- PDB id
- 9HMW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Arabidopsis thaliana 80S ribosome OVAC mutant in complex with P- and E-site tRNAs and mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.25 Å
Loop
- Sequence
- GGAC*GAGUCAAAGAGUGC
- Length
- 18 nucleotides
- Bulged bases
- 9HMW|1|A|G|395, 9HMW|1|A|G|399
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9HMW|1|A|G|373
9HMW|1|A|G|374
9HMW|1|A|A|375
9HMW|1|A|C|376
*
9HMW|1|A|G|387
9HMW|1|A|A|388
9HMW|1|A|G|389
9HMW|1|A|U|390
9HMW|1|A|C|391
9HMW|1|A|A|392
9HMW|1|A|A|393
9HMW|1|A|A|394
9HMW|1|A|G|395
9HMW|1|A|A|396
9HMW|1|A|G|397
9HMW|1|A|U|398
9HMW|1|A|G|399
9HMW|1|A|C|400
Current chains
- Chain A
- Ribosomal RNA 25S
Nearby chains
- Chain 3
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain BA
- Large ribosomal subunit protein eL39z/eL39x
- Chain BM
- Large ribosomal subunit protein uL22z
- Chain BO
- Large ribosomal subunit protein uL24z
- Chain L3
- Nascent polypeptide (poly-A)
Coloring options: