IL_9HMW_058
3D structure
- PDB id
- 9HMW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Arabidopsis thaliana 80S ribosome OVAC mutant in complex with P- and E-site tRNAs and mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.25 Å
Loop
- Sequence
- GAACCCACAAAG*CGAAAAUGGAUGGCGC
- Length
- 28 nucleotides
- Bulged bases
- 9HMW|1|A|A|1206, 9HMW|1|A|A|1312, 9HMW|1|A|U|1315, 9HMW|1|A|G|1316
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9HMW|1|A|G|1204
9HMW|1|A|A|1205
9HMW|1|A|A|1206
9HMW|1|A|C|1207
9HMW|1|A|C|1208
9HMW|1|A|C|1209
9HMW|1|A|A|1210
9HMW|1|A|C|1211
9HMW|1|A|A|1212
9HMW|1|A|A|1213
9HMW|1|A|A|1214
9HMW|1|A|G|1215
*
9HMW|1|A|C|1309
9HMW|1|A|G|1310
9HMW|1|A|A|1311
9HMW|1|A|A|1312
9HMW|1|A|A|1313
9HMW|1|A|A|1314
9HMW|1|A|U|1315
9HMW|1|A|G|1316
9HMW|1|A|G|1317
9HMW|1|A|A|1318
9HMW|1|A|U|1319
9HMW|1|A|G|1320
9HMW|1|A|G|1321
9HMW|1|A|C|1322
9HMW|1|A|G|1323
9HMW|1|A|C|1324
Current chains
- Chain A
- Ribosomal RNA 25S
Nearby chains
- Chain AW
- Large ribosomal subunit protein eL33y
- Chain BH
- Large ribosomal subunit protein uL13y
- Chain BJ
- Large ribosomal subunit protein uL16y
- Chain BR
- Ribosomal protein L30/L7 family protein
- Chain BS
- Large ribosomal subunit protein uL3z
- Chain C3
- 5S ribosomal RNA; 5S rRNA
- Chain Ga
- Ubiquitin-ribosomal protein eL40z fusion protein
Coloring options: