IL_9HMW_074

3D structure

PDB id

9HMW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Arabidopsis thaliana 80S ribosome OVAC mutant in complex with P- and E-site tRNAs and mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.25 Å

Loop

Sequence

G(1MG)AGU*AGGAC

Length

10 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: 1MG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HMW|1|A|G|1645
9HMW|1|A|1MG|1646
9HMW|1|A|A|1647
9HMW|1|A|G|1648
9HMW|1|A|U|1649
*
9HMW|1|A|A|1808
9HMW|1|A|G|1809
9HMW|1|A|G|1810
9HMW|1|A|A|1811
9HMW|1|A|C|1812

Current chains

Chain A

Ribosomal RNA 25S

Nearby chains

Chain AP

Large ribosomal subunit protein eL27x

Chain BQ

Large ribosomal subunit protein uL2z

Chain Fa

Large ribosomal subunit protein eL34z