IL_9HMW_137

3D structure

PDB id

9HMW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Arabidopsis thaliana 80S ribosome OVAC mutant in complex with P- and E-site tRNAs and mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.25 Å

Loop

Sequence

CUAAGUC*GCCG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HMW|1|A|C|3213
9HMW|1|A|U|3214
9HMW|1|A|A|3215
9HMW|1|A|A|3216
9HMW|1|A|G|3217
9HMW|1|A|U|3218
9HMW|1|A|C|3219
*
9HMW|1|A|G|3244
9HMW|1|A|C|3245
9HMW|1|A|C|3246
9HMW|1|A|G|3247

Current chains

Chain A

Ribosomal RNA 25S

Nearby chains

Chain AH

Large ribosomal subunit protein eL14y

Chain AW

Large ribosomal subunit protein eL33y

Chain BF

Large ribosomal subunit protein eL6y

Chain BH

Large ribosomal subunit protein uL13y