IL_9HMW_164

3D structure

PDB id

9HMW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Arabidopsis thaliana 80S ribosome OVAC mutant in complex with P- and E-site tRNAs and mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.25 Å

Loop

Sequence

GGAUAAC*GCUAAUAC

Length

15 nucleotides

Bulged bases

9HMW|1|h1|U|168

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HMW|1|h1|G|141
9HMW|1|h1|G|142
9HMW|1|h1|A|143
9HMW|1|h1|U|144
9HMW|1|h1|A|145
9HMW|1|h1|A|146
9HMW|1|h1|C|147
*
9HMW|1|h1|G|163
9HMW|1|h1|C|164
9HMW|1|h1|U|165
9HMW|1|h1|A|166
9HMW|1|h1|A|167
9HMW|1|h1|U|168
9HMW|1|h1|A|169
9HMW|1|h1|C|170

Current chains

Chain h1

Ribosomal RNA 18S

Nearby chains

Chain Ka

Small ribosomal subunit protein eS24y

Chain Ta

Small ribosomal subunit protein eS6y