IL_9HMW_187

3D structure

PDB id

9HMW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Arabidopsis thaliana 80S ribosome OVAC mutant in complex with P- and E-site tRNAs and mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.25 Å

Loop

Sequence

GUU(A2M)AAA*UC

Length

9 nucleotides

Bulged bases

9HMW|1|h1|A2M|621

QA status

Modified nucleotides: A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HMW|1|h1|G|618
9HMW|1|h1|U|619
9HMW|1|h1|U|620
9HMW|1|h1|A2M|621
9HMW|1|h1|A|622
9HMW|1|h1|A|623
9HMW|1|h1|A|624
*
9HMW|1|h1|U|1105
9HMW|1|h1|C|1106

Current chains

Chain h1

Ribosomal RNA 18S

Nearby chains

Chain Ma

Small ribosomal subunit protein eS26y

Chain Va

Small ribosomal subunit protein uS12y