IL_9HMW_199

3D structure

PDB id

9HMW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Arabidopsis thaliana 80S ribosome OVAC mutant in complex with P- and E-site tRNAs and mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.25 Å

Loop

Sequence

GUAU*AGAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HMW|1|h1|G|886
9HMW|1|h1|U|887
9HMW|1|h1|A|888
9HMW|1|h1|U|889
*
9HMW|1|h1|A|925
9HMW|1|h1|G|926
9HMW|1|h1|A|927
9HMW|1|h1|C|928

Current chains

Chain h1

Ribosomal RNA 18S

Nearby chains

Chain BE

Large ribosomal subunit protein eL43y

Chain BQ

Large ribosomal subunit protein uL2z

Chain BV

Small ribosomal subunit protein eS1y

Chain Ma

Small ribosomal subunit protein eS26y

Chain Ua

Small ribosomal subunit protein uS11y