IL_9HMW_200

3D structure

PDB id

9HMW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Arabidopsis thaliana 80S ribosome OVAC mutant in complex with P- and E-site tRNAs and mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.25 Å

Loop

Sequence

GUCAG*CUUGGAUU

Length

13 nucleotides

Bulged bases

9HMW|1|h1|G|914

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HMW|1|h1|G|896
9HMW|1|h1|U|897
9HMW|1|h1|C|898
9HMW|1|h1|A|899
9HMW|1|h1|G|900
*
9HMW|1|h1|C|911
9HMW|1|h1|U|912
9HMW|1|h1|U|913
9HMW|1|h1|G|914
9HMW|1|h1|G|915
9HMW|1|h1|A|916
9HMW|1|h1|U|917
9HMW|1|h1|U|918

Current chains

Chain h1

Ribosomal RNA 18S

Nearby chains

Chain A

Large subunit ribosomal RNA; LSU rRNA

Chain BV

Small ribosomal subunit protein eS1y

Chain Ua

Small ribosomal subunit protein uS11y