IL_9HMW_227

3D structure

PDB id

9HMW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Arabidopsis thaliana 80S ribosome OVAC mutant in complex with P- and E-site tRNAs and mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.25 Å

Loop

Sequence

GUA*U(PSU)C

Length

6 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HMW|1|h1|G|1480
9HMW|1|h1|U|1481
9HMW|1|h1|A|1482
*
9HMW|1|h1|U|1530
9HMW|1|h1|PSU|1531
9HMW|1|h1|C|1532

Current chains

Chain h1

Ribosomal RNA 18S

Nearby chains

Chain AD

Small ribosomal subunit protein uS7y

Chain AF

Small ribosomal subunit protein uS9z

Chain BL

Small ribosomal subunit protein eS19x

Chain La

Small ribosomal subunit protein eS25w

Chain Wa

Small ribosomal subunit protein uS13z/uS13y/uS13x