IL_9HMW_230

3D structure

PDB id

9HMW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Arabidopsis thaliana 80S ribosome OVAC mutant in complex with P- and E-site tRNAs and mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.25 Å

Loop

Sequence

GGGAUA*UUCAAC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HMW|1|h1|G|1542
9HMW|1|h1|G|1543
9HMW|1|h1|G|1544
9HMW|1|h1|A|1545
9HMW|1|h1|U|1546
9HMW|1|h1|A|1547
*
9HMW|1|h1|U|1568
9HMW|1|h1|U|1569
9HMW|1|h1|C|1570
9HMW|1|h1|A|1571
9HMW|1|h1|A|1572
9HMW|1|h1|C|1573

Current chains

Chain h1

Ribosomal RNA 18S

Nearby chains

Chain BL

Small ribosomal subunit protein eS19x

Chain Wa

Small ribosomal subunit protein uS13z/uS13y/uS13x