IL_9HQV_003
3D structure
- PDB id
- 9HQV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the small subunit of the mitochondrial ribosome from Toxoplasma gondii
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.52 Å
Loop
- Sequence
- CUACACA*UAAUG
- Length
- 12 nucleotides
- Bulged bases
- 9HQV|1|SE|U|30, 9HQV|1|SE|C|32
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9HQV|1|SE|C|29
9HQV|1|SE|U|30
9HQV|1|SE|A|31
9HQV|1|SE|C|32
9HQV|1|SE|A|33
9HQV|1|SE|C|34
9HQV|1|SE|A|35
*
9HQV|1|SE|U|46
9HQV|1|SE|A|47
9HQV|1|SE|A|48
9HQV|1|SE|U|49
9HQV|1|SE|G|50
Current chains
- Chain SE
- SSU-5
Nearby chains
- Chain Bl
- Putative 30S ribosomal protein S16
- Chain By
- Homeodomain-like containing protein
- Chain SA
- SSU-1
- Chain SB
- SSU-2
- Chain SD
- SSU-4
- Chain Yv
- mS138
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