IL_9HQV_006
3D structure
- PDB id
- 9HQV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the small subunit of the mitochondrial ribosome from Toxoplasma gondii
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.52 Å
Loop
- Sequence
- CGUAAAA*UG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9HQV|1|SF|C|96
9HQV|1|SF|G|97
9HQV|1|SF|U|98
9HQV|1|SF|A|99
9HQV|1|SF|A|100
9HQV|1|SF|A|101
9HQV|1|SF|A|102
*
9HQV|1|SK|U|6
9HQV|1|SK|G|7
Current chains
- Chain SF
- SSU-6
- Chain SK
- SSU-11
Nearby chains
- Chain Bd
- Putative ribosomal protein S8
- Chain Bh
- Putative 30S ribosomal protein S12
- Chain Bm
- Putative ribosomal protein S17
- Chain Bp
- mS23
- Chain Bx
- Mitochondrial mRNA-processing protein COX24 C-terminal domain-containing protein
- Chain SA
- SSU-1
- Chain SI
- SSU-9
- Chain SJ
- SSU-10
- Chain SU
- SSU-21
- Chain Yj
- DnaJ domain-containing protein
- Chain Yr
- Acylphosphatase-like domain-containing protein
- Chain Yu
- mS137
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