IL_9HQV_008
3D structure
- PDB id
- 9HQV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the small subunit of the mitochondrial ribosome from Toxoplasma gondii
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.52 Å
Loop
- Sequence
- GUUCAUC*GUUAGUU
- Length
- 14 nucleotides
- Bulged bases
- 9HQV|1|SJ|G|26
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9HQV|1|SF|G|106
9HQV|1|SF|U|107
9HQV|1|SF|U|108
9HQV|1|SF|C|109
9HQV|1|SF|A|110
9HQV|1|SF|U|111
9HQV|1|SF|C|112
*
9HQV|1|SJ|G|22
9HQV|1|SJ|U|23
9HQV|1|SJ|U|24
9HQV|1|SJ|A|25
9HQV|1|SJ|G|26
9HQV|1|SJ|U|27
9HQV|1|SJ|U|28
Current chains
- Chain SF
- SSU-6
- Chain SJ
- SSU-10
Nearby chains
- Chain Bb
- Putative 30S ribosomal protein S5
- Chain Bd
- Putative ribosomal protein S8
- Chain Bh
- Putative 30S ribosomal protein S12
- Chain Bk
- Putative 30S ribosomal protein S15
- Chain Bm
- Putative ribosomal protein S17
- Chain SC
- SSU-3
- Chain SD
- SSU-4
- Chain SG
- SSU-7
- Chain SK
- SSU-11
- Chain Yg
- Thioredoxin domain-containing protein
- Chain Yu
- mS137
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