IL_9HUQ_068

3D structure

PDB id

9HUQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of WT E.coli ribosome with complexed filament nascent chain at length 47, with P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.49 Å

Loop

Sequence

AC*GCU

Length

5 nucleotides

Bulged bases

9HUQ|1|b|C|1732

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9HUQ_068 not in the Motif Atlas

Geometric match to IL_8B0X_130

Geometric discrepancy: 0.328

The information below is about IL_8B0X_130

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_05642.3

Basepair signature

cWW-L-cWW

Number of instances in this motif group

61

Unit IDs

9HUQ|1|b|A|1727
9HUQ|1|b|C|1728
*
9HUQ|1|b|G|1731
9HUQ|1|b|C|1732
9HUQ|1|b|U|1733

Current chains

Chain b

23S rRNA

Nearby chains