IL_9HYM_094
3D structure
- PDB id
- 9HYM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of WT E.coli ribosome with complexed filament nascent chain at length 34, with mRNA, P-site and A-site tRNAs, and mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- CA*UACG
- Length
- 6 nucleotides
- Bulged bases
- 9HYM|1|b|A|2572, 9HYM|1|b|C|2573
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9HYM_094 not in the Motif Atlas
- Homologous match to IL_7A0S_090
- Geometric discrepancy: 0.4706
- The information below is about IL_7A0S_090
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_44609.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 24
Unit IDs
9HYM|1|b|C|2512
9HYM|1|b|A|2513
*
9HYM|1|b|U|2571
9HYM|1|b|A|2572
9HYM|1|b|C|2573
9HYM|1|b|G|2574
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain d
- 50S ribosomal protein L3
- Chain j
- Large ribosomal subunit protein uL13
- Chain v
- Transfer RNA; tRNA
- Chain z
- Gelation factor
Coloring options: