IL_9HYM_096
3D structure
- PDB id
- 9HYM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of WT E.coli ribosome with complexed filament nascent chain at length 34, with mRNA, P-site and A-site tRNAs, and mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- CG*CAG
- Length
- 5 nucleotides
- Bulged bases
- 9HYM|1|b|A|2602
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9HYM_096 not in the Motif Atlas
- Geometric match to IL_8B0X_159
- Geometric discrepancy: 0.1913
- The information below is about IL_8B0X_159
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_14190.2
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 160
Unit IDs
9HYM|1|b|C|2591
9HYM|1|b|G|2592
*
9HYM|1|b|C|2601
9HYM|1|b|A|2602
9HYM|1|b|G|2603
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain A
- Transfer RNA; tRNA
- Chain c
- Large ribosomal subunit protein uL2
- Chain v
- Transfer RNA; tRNA
- Chain y
- Large ribosomal subunit protein bL27
- Chain z
- Gelation factor
Coloring options: