IL_9I14_018

3D structure

PDB id

9I14 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF HCT15 POLYSOMES IN HYBRID-PRE STATE

Experimental method

ELECTRON MICROSCOPY

Resolution

3.34 Å

Loop

Sequence

GUGAAAC*G(OMU)GGAUC

Length

14 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I14|1|L5|G|415
9I14|1|L5|U|416
9I14|1|L5|G|417
9I14|1|L5|A|418
9I14|1|L5|A|419
9I14|1|L5|A|420
9I14|1|L5|C|421
*
9I14|1|L8|G|13
9I14|1|L8|OMU|14
9I14|1|L8|G|15
9I14|1|L8|G|16
9I14|1|L8|A|17
9I14|1|L8|U|18
9I14|1|L8|C|19

Current chains

Chain L5

LSU 28S rRNA

Chain L8

5.8S rRNA

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LP

60S ribosomal protein L17

Chain Le

60S ribosomal protein L32