IL_9I14_023

3D structure

PDB id

9I14 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF HCT15 POLYSOMES IN HYBRID-PRE STATE

Experimental method

ELECTRON MICROSCOPY

Resolution

3.34 Å

Loop

Sequence

AUUCAAC*GCGCAUUU

Length

15 nucleotides

Bulged bases

9I14|1|L5|U|467, 9I14|1|L5|C|685, 9I14|1|L5|U|687

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I14|1|L5|A|466
9I14|1|L5|U|467
9I14|1|L5|U|468
9I14|1|L5|C|469
9I14|1|L5|A|470
9I14|1|L5|A|471
9I14|1|L5|C|472
*
9I14|1|L5|G|682
9I14|1|L5|C|683
9I14|1|L5|G|684
9I14|1|L5|C|685
9I14|1|L5|A|686
9I14|1|L5|U|687
9I14|1|L5|U|688
9I14|1|L5|U|689

Current chains

Chain L5

LSU 28S rRNA

Nearby chains

Chain LE

Large ribosomal subunit protein eL6

Chain Lr

60S ribosomal protein L28