IL_9I14_027
3D structure
- PDB id
- 9I14 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF HCT15 POLYSOMES IN HYBRID-PRE STATE
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.34 Å
Loop
- Sequence
- UCGGCG*CCCCG
- Length
- 11 nucleotides
- Bulged bases
- 9I14|1|L5|G|497
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9I14_027 not in the Motif Atlas
- Geometric match to IL_7VYX_004
- Geometric discrepancy: 0.3691
- The information below is about IL_7VYX_004
- Detailed Annotation
- Partly complementary
- Broad Annotation
- Partly complementary
- Motif group
- IL_71154.6
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 18
Unit IDs
9I14|1|L5|U|494
9I14|1|L5|C|495
9I14|1|L5|G|496
9I14|1|L5|G|497
9I14|1|L5|C|498
9I14|1|L5|G|499
*
9I14|1|L5|C|655
9I14|1|L5|C|656
9I14|1|L5|C|657
9I14|1|L5|C|658
9I14|1|L5|G|659
Current chains
- Chain L5
- LSU 28S rRNA
Nearby chains
- Chain LC
- 60S ribosomal protein L4
Coloring options: