IL_9I14_059

3D structure

PDB id

9I14 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF HCT15 POLYSOMES IN HYBRID-PRE STATE

Experimental method

ELECTRON MICROSCOPY

Resolution

3.34 Å

Loop

Sequence

G(OMG)G*UAAUC

Length

8 nucleotides

Bulged bases

9I14|1|L5|OMG|1625, 9I14|1|L5|A|1637, 9I14|1|L5|A|1638, 9I14|1|L5|U|1639

QA status

Modified nucleotides: OMG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I14|1|L5|G|1624
9I14|1|L5|OMG|1625
9I14|1|L5|G|1626
*
9I14|1|L5|U|1636
9I14|1|L5|A|1637
9I14|1|L5|A|1638
9I14|1|L5|U|1639
9I14|1|L5|C|1640

Current chains

Chain L5

LSU 28S rRNA

Nearby chains

Chain LA

60S ribosomal protein L8

Chain LN

60S ribosomal protein L15

Chain LP

60S ribosomal protein L17

Chain Lj

Large ribosomal subunit protein eL37