IL_9I14_078

3D structure

PDB id

9I14 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF HCT15 POLYSOMES IN HYBRID-PRE STATE

Experimental method

ELECTRON MICROSCOPY

Resolution

3.34 Å

Loop

Sequence

UAUAGACAG*CCGAA

Length

14 nucleotides

Bulged bases

9I14|1|L5|A|1960

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I14|1|L5|U|1957
9I14|1|L5|A|1958
9I14|1|L5|U|1959
9I14|1|L5|A|1960
9I14|1|L5|G|1961
9I14|1|L5|A|1962
9I14|1|L5|C|1963
9I14|1|L5|A|1964
9I14|1|L5|G|1965
*
9I14|1|L5|C|2022
9I14|1|L5|C|2023
9I14|1|L5|G|2024
9I14|1|L5|A|2025
9I14|1|L5|A|2026

Current chains

Chain L5

LSU 28S rRNA

Nearby chains

Chain LS

60S ribosomal protein L18a

Chain Lm

Ubiquitin-60S ribosomal protein L40