IL_9I14_105

3D structure

PDB id

9I14 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF HCT15 POLYSOMES IN HYBRID-PRE STATE

Experimental method

ELECTRON MICROSCOPY

Resolution

3.34 Å

Loop

Sequence

GGGUC*GGCGCCUAGC

Length

15 nucleotides

Bulged bases

9I14|1|L5|A|3596

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I14|1|L5|G|2901
9I14|1|L5|G|2902
9I14|1|L5|G|2903
9I14|1|L5|U|2904
9I14|1|L5|C|2905
*
9I14|1|L5|G|3589
9I14|1|L5|G|3590
9I14|1|L5|C|3591
9I14|1|L5|G|3592
9I14|1|L5|C|3593
9I14|1|L5|C|3594
9I14|1|L5|U|3595
9I14|1|L5|A|3596
9I14|1|L5|G|3597
9I14|1|L5|C|3598

Current chains

Chain L5

LSU 28S rRNA

Nearby chains

Chain LR

60S ribosomal protein L19