IL_9I14_143

3D structure

PDB id

9I14 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF HCT15 POLYSOMES IN HYBRID-PRE STATE

Experimental method

ELECTRON MICROSCOPY

Resolution

3.34 Å

Loop

Sequence

UGUAU(OMG)*CGAAG

Length

11 nucleotides

Bulged bases

9I14|1|L5|U|4634, 9I14|1|L5|U|4636

QA status

Modified nucleotides: OMG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I14|1|L5|U|4632
9I14|1|L5|G|4633
9I14|1|L5|U|4634
9I14|1|L5|A|4635
9I14|1|L5|U|4636
9I14|1|L5|OMG|4637
*
9I14|1|L5|C|4662
9I14|1|L5|G|4663
9I14|1|L5|A|4664
9I14|1|L5|A|4665
9I14|1|L5|G|4666

Current chains

Chain L5

LSU 28S rRNA

Nearby chains

Chain LB

60S ribosomal protein L3

Chain LW

60S ribosomal protein L24

Chain Ld

60S ribosomal protein L31