IL_9I14_159
3D structure
- PDB id
- 9I14 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF HCT15 POLYSOMES IN HYBRID-PRE STATE
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.34 Å
Loop
- Sequence
- AGAG*CGAU
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9I14_159 not in the Motif Atlas
- Homologous match to IL_9H3G_146
- Geometric discrepancy: 0.1289
- The information below is about IL_9H3G_146
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_58355.5
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 50
Unit IDs
9I14|1|L5|A|5014
9I14|1|L5|G|5015
9I14|1|L5|A|5016
9I14|1|L5|G|5017
*
9I14|1|L5|C|5032
9I14|1|L5|G|5033
9I14|1|L5|A|5034
9I14|1|L5|U|5035
Current chains
- Chain L5
- LSU 28S rRNA
Nearby chains
- Chain LR
- 60S ribosomal protein L19
- Chain SI
- 40S ribosomal protein S8
Coloring options: