3D structure

PDB id
9I14 (explore in PDB, NAKB, or RNA 3D Hub)
Description
CRYO-EM STRUCTURE OF HCT15 POLYSOMES IN HYBRID-PRE STATE
Experimental method
ELECTRON MICROSCOPY
Resolution
3.34 Å

Loop

Sequence
GGAGUAUG*UGAAAC
Length
14 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9I14|1|S2|G|1168
9I14|1|S2|G|1169
9I14|1|S2|A|1170
9I14|1|S2|G|1171
9I14|1|S2|U|1172
9I14|1|S2|A|1173
9I14|1|S2|U|1174
9I14|1|S2|G|1175
*
9I14|1|S2|U|1186
9I14|1|S2|G|1187
9I14|1|S2|A|1188
9I14|1|S2|A|1189
9I14|1|S2|A|1190
9I14|1|S2|C|1191

Current chains

Chain S2
SSU 18S rRNA

Nearby chains

Chain Ln
60S ribosomal protein L41
Chain SX
40S ribosomal protein S23

Coloring options:

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