IL_9I2D_045
3D structure
- PDB id
- 9I2D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- NMT1-NAC bound human RNC with 10 amino acid ARF1-linker
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.19 Å
Loop
- Sequence
- CGAG*CGAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9I2D_045 not in the Motif Atlas
- Homologous match to IL_8GLP_052
- Geometric discrepancy: 0.1073
- The information below is about IL_8GLP_052
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_58355.5
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 50
Unit IDs
9I2D|1|L5|C|1431
9I2D|1|L5|G|1432
9I2D|1|L5|A|1433
9I2D|1|L5|G|1434
*
9I2D|1|L5|C|1450
9I2D|1|L5|G|1451
9I2D|1|L5|A|1452
9I2D|1|L5|G|1453
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LQ
- 60S ribosomal protein L18
Coloring options: