IL_9I2D_146
3D structure
- PDB id
- 9I2D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- NMT1-NAC bound human RNC with 10 amino acid ARF1-linker
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.19 Å
Loop
- Sequence
- UGUAUG*CGAAG
- Length
- 11 nucleotides
- Bulged bases
- 9I2D|1|L5|U|4634, 9I2D|1|L5|U|4636
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9I2D_146 not in the Motif Atlas
- Homologous match to IL_9H3G_131
- Geometric discrepancy: 0.1863
- The information below is about IL_9H3G_131
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_43276.1
- Basepair signature
- cWW-L-R-tHW-L-cWW
- Number of instances in this motif group
- 5
Unit IDs
9I2D|1|L5|U|4632
9I2D|1|L5|G|4633
9I2D|1|L5|U|4634
9I2D|1|L5|A|4635
9I2D|1|L5|U|4636
9I2D|1|L5|G|4637
*
9I2D|1|L5|C|4662
9I2D|1|L5|G|4663
9I2D|1|L5|A|4664
9I2D|1|L5|A|4665
9I2D|1|L5|G|4666
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LB
- 60S ribosomal protein L3
- Chain LW
- 60S ribosomal protein L24
- Chain Ld
- 60S ribosomal protein L31
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