IL_9I2D_164
3D structure
- PDB id
- 9I2D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- NMT1-NAC bound human RNC with 10 amino acid ARF1-linker
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.19 Å
Loop
- Sequence
- AGAG*CGAU
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9I2D_164 not in the Motif Atlas
- Homologous match to IL_8GLP_179
- Geometric discrepancy: 0.1129
- The information below is about IL_8GLP_179
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_58355.5
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 50
Unit IDs
9I2D|1|L5|A|5014
9I2D|1|L5|G|5015
9I2D|1|L5|A|5016
9I2D|1|L5|G|5017
*
9I2D|1|L5|C|5032
9I2D|1|L5|G|5033
9I2D|1|L5|A|5034
9I2D|1|L5|U|5035
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LR
- 60S ribosomal protein L19
- Chain SI
- 40S ribosomal protein S8
Coloring options: