3D structure

PDB id
9I2D (explore in PDB, NAKB, or RNA 3D Hub)
Description
NMT1-NAC bound human RNC with 10 amino acid ARF1-linker
Experimental method
ELECTRON MICROSCOPY
Resolution
2.19 Å

Loop

Sequence
GCGAU*GCAGC
Length
10 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9I2D|1|S2|G|1097
9I2D|1|S2|C|1098
9I2D|1|S2|G|1099
9I2D|1|S2|A|1100
9I2D|1|S2|U|1101
*
9I2D|1|S2|G|1131
9I2D|1|S2|C|1132
9I2D|1|S2|A|1133
9I2D|1|S2|G|1134
9I2D|1|S2|C|1135

Current chains

Chain S2
18S rRNA

Nearby chains

Chain SA
40S ribosomal protein SA
Chain SB
40S ribosomal protein S3a
Chain SN
40S ribosomal protein S13
Chain SR
40S ribosomal protein S17
Chain SV
40S ribosomal protein S21
Chain SW
40S ribosomal protein S15a
Chain Sa
40S ribosomal protein S26
Chain Sb
40S ribosomal protein S27

Coloring options:

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