IL_9I2D_244

3D structure

PDB id

9I2D (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human RNC with 10 amino acid ARF1-linker

Experimental method

ELECTRON MICROSCOPY

Resolution

2.19 Å

Loop

Sequence

GUGCCUACC*GUAACC

Length

15 nucleotides

Bulged bases

9I2D|1|S2|A|1580, 9I2D|1|S2|C|1581

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I2D|1|S2|G|1550
9I2D|1|S2|U|1551
9I2D|1|S2|G|1552
9I2D|1|S2|C|1553
9I2D|1|S2|C|1554
9I2D|1|S2|U|1555
9I2D|1|S2|A|1556
9I2D|1|S2|C|1557
9I2D|1|S2|C|1558
*
9I2D|1|S2|G|1577
9I2D|1|S2|U|1578
9I2D|1|S2|A|1579
9I2D|1|S2|A|1580
9I2D|1|S2|C|1581
9I2D|1|S2|C|1582

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SD

40S ribosomal protein S3

Chain SK

40S ribosomal protein S10

Chain ST

40S ribosomal protein S19

Chain SU

40S ribosomal protein S20

Chain Sd

40S ribosomal protein S29