IL_9I2E_035

3D structure

PDB id

9I2E (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human ribosome (combined translational states)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.95 Å

Loop

Sequence

AAGG*CAGCAGCACU

Length

14 nucleotides

Bulged bases

9I2E|1|L5|A|932, 9I2E|1|L5|C|934, 9I2E|1|L5|A|935, 9I2E|1|L5|C|936

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I2E|1|L5|A|732
9I2E|1|L5|A|733
9I2E|1|L5|G|734
9I2E|1|L5|G|735
*
9I2E|1|L5|C|928
9I2E|1|L5|A|929
9I2E|1|L5|G|930
9I2E|1|L5|C|931
9I2E|1|L5|A|932
9I2E|1|L5|G|933
9I2E|1|L5|C|934
9I2E|1|L5|A|935
9I2E|1|L5|C|936
9I2E|1|L5|U|937

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LM

60S ribosomal protein L14

Chain LS

60S ribosomal protein L18a