IL_9I2E_085
3D structure
- PDB id
- 9I2E (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- NMT1-NAC bound human ribosome (combined translational states)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.95 Å
Loop
- Sequence
- CAGUCGAGAGUGGACGGGAGCGGC*GAGCCCCGCGGACGCUACG
- Length
- 43 nucleotides
- Bulged bases
- 9I2E|1|L5|G|2096, 9I2E|1|L5|U|2097, 9I2E|1|L5|C|2255, 9I2E|1|L5|C|2266, 9I2E|1|L5|U|2267, 9I2E|1|L5|C|2269
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9I2E|1|L5|C|2087
9I2E|1|L5|A|2088
9I2E|1|L5|G|2089
9I2E|1|L5|U|2090
9I2E|1|L5|C|2091
9I2E|1|L5|G|2092
9I2E|1|L5|A|2093
9I2E|1|L5|G|2094
9I2E|1|L5|A|2095
9I2E|1|L5|G|2096
9I2E|1|L5|U|2097
9I2E|1|L5|G|2098
9I2E|1|L5|G|2099
9I2E|1|L5|A|2100
9I2E|1|L5|C|2101
9I2E|1|L5|G|2102
9I2E|1|L5|G|2103
9I2E|1|L5|G|2104
9I2E|1|L5|A|2105
9I2E|1|L5|G|2106
9I2E|1|L5|C|2107
9I2E|1|L5|G|2108
9I2E|1|L5|G|2109
9I2E|1|L5|C|2110
*
9I2E|1|L5|G|2252
9I2E|1|L5|A|2253
9I2E|1|L5|G|2254
9I2E|1|L5|C|2255
9I2E|1|L5|C|2256
9I2E|1|L5|C|2257
9I2E|1|L5|C|2258
9I2E|1|L5|G|2259
9I2E|1|L5|C|2260
9I2E|1|L5|G|2261
9I2E|1|L5|G|2262
9I2E|1|L5|A|2263
9I2E|1|L5|C|2264
9I2E|1|L5|G|2265
9I2E|1|L5|C|2266
9I2E|1|L5|U|2267
9I2E|1|L5|A|2268
9I2E|1|L5|C|2269
9I2E|1|L5|G|2270
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LC
- 60S ribosomal protein L4
- Chain LE
- Large ribosomal subunit protein eL6
- Chain LF
- Large ribosomal subunit protein uL30
- Chain LQ
- 60S ribosomal protein L18
- Chain Lb
- 60S ribosomal protein L29
- Chain Lr
- 60S ribosomal protein L28
Coloring options: