IL_9I2E_161

3D structure

PDB id

9I2E (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human ribosome (combined translational states)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.95 Å

Loop

Sequence

GGAAACGGG*CCCUCGCC

Length

17 nucleotides

Bulged bases

9I2E|1|L5|C|4895

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I2E|1|L5|G|4890
9I2E|1|L5|G|4891
9I2E|1|L5|A|4892
9I2E|1|L5|A|4893
9I2E|1|L5|A|4894
9I2E|1|L5|C|4895
9I2E|1|L5|G|4896
9I2E|1|L5|G|4897
9I2E|1|L5|G|4898
*
9I2E|1|L5|C|4922
9I2E|1|L5|C|4923
9I2E|1|L5|C|4924
9I2E|1|L5|U|4925
9I2E|1|L5|C|4926
9I2E|1|L5|G|4927
9I2E|1|L5|C|4928
9I2E|1|L5|C|4929

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LE

Large ribosomal subunit protein eL6

Chain LM

60S ribosomal protein L14

Chain LO

60S ribosomal protein L13a