IL_9I2E_244

3D structure

PDB id

9I2E (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human ribosome (combined translational states)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.95 Å

Loop

Sequence

UGCA*UG

Length

6 nucleotides

Bulged bases

9I2E|1|S2|G|1330, 9I2E|1|S2|C|1331

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I2E|1|S2|U|1329
9I2E|1|S2|G|1330
9I2E|1|S2|C|1331
9I2E|1|S2|A|1332
*
9I2E|1|S2|U|1499
9I2E|1|S2|G|1500

Current chains

Chain S2

18S rRNA

Nearby chains

Chain CB

Elongation factor 2

Chain CD

Isoform 2 of SERPINE1 mRNA-binding protein 1

Chain SD

40S ribosomal protein S3

Chain SU

40S ribosomal protein S20