IL_9I89_124

3D structure

PDB id

9I89 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the A2058-dimethylated Staphylococcus aureus 70S ribosome complexed with clincelin

Experimental method

ELECTRON MICROSCOPY

Resolution

3.01 Å

Loop

Sequence

GGAUAAC*GCUAAUAC

Length

15 nucleotides

Bulged bases

9I89|1|a|U|173

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I89|1|a|G|147
9I89|1|a|G|148
9I89|1|a|A|149
9I89|1|a|U|150
9I89|1|a|A|151
9I89|1|a|A|152
9I89|1|a|C|153
*
9I89|1|a|G|168
9I89|1|a|C|169
9I89|1|a|U|170
9I89|1|a|A|171
9I89|1|a|A|172
9I89|1|a|U|173
9I89|1|a|A|174
9I89|1|a|C|175

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain u

Small ribosomal subunit protein bS20