IL_9I89_136

3D structure

PDB id

9I89 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the A2058-dimethylated Staphylococcus aureus 70S ribosome complexed with clincelin

Experimental method

ELECTRON MICROSCOPY

Resolution

3.01 Å

Loop

Sequence

CGUAAAG*CG

Length

9 nucleotides

Bulged bases

9I89|1|a|A|580

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I89|1|a|C|577
9I89|1|a|G|578
9I89|1|a|U|579
9I89|1|a|A|580
9I89|1|a|A|581
9I89|1|a|A|582
9I89|1|a|G|583
*
9I89|1|a|C|890
9I89|1|a|G|891

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain f

Small ribosomal subunit protein uS5

Chain m

Small ribosomal subunit protein uS12

Chain r

Small ribosomal subunit protein uS17