IL_9IOT_142
3D structure
- PDB id
- 9IOT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of Escherichia coli hibernating ribosome with RNase I mutant
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- AGAAUU*AGGAAU
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9IOT|1|a|A|673
9IOT|1|a|G|674
9IOT|1|a|A|675
9IOT|1|a|A|676
9IOT|1|a|U|677
9IOT|1|a|U|678
*
9IOT|1|a|A|712
9IOT|1|a|G|713
9IOT|1|a|G|714
9IOT|1|a|A|715
9IOT|1|a|A|716
9IOT|1|a|U|717
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain D
- Large ribosomal subunit protein uL2
- Chain f
- Small ribosomal subunit protein bS6, fully modified isoform
- Chain k
- Small ribosomal subunit protein uS11
- Chain r
- Small ribosomal subunit protein bS18
- Chain u
- 30S ribosomal protein S21
Coloring options: