IL_9IOT_157
3D structure
- PDB id
- 9IOT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of Escherichia coli hibernating ribosome with RNase I mutant
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- UG*CAA
- Length
- 5 nucleotides
- Bulged bases
- 9IOT|1|a|A|1196
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9IOT_157 not in the Motif Atlas
- Geometric match to IL_5J7L_049
- Geometric discrepancy: 0.1743
- The information below is about IL_5J7L_049
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.7
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 132
Unit IDs
9IOT|1|a|U|1060
9IOT|1|a|G|1061
*
9IOT|1|a|C|1195
9IOT|1|a|A|1196
9IOT|1|a|A|1197
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain c
- Small ribosomal subunit protein uS3
- Chain e
- Small ribosomal subunit protein uS5
- Chain j
- Small ribosomal subunit protein uS10
- Chain n
- Small ribosomal subunit protein uS14
- Chain v
- Ribosome hibernation promoting factor
Coloring options: