IL_9ISV_005

3D structure

PDB id

9ISV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Enterococcus faecalis ROOL RNA monomer

Experimental method

ELECTRON MICROSCOPY

Resolution

3.07 Å

Loop

Sequence

UAC*GUA

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9ISV_005 not in the Motif Atlas

Geometric match to IL_8AF0_002

Geometric discrepancy: 0.2041

The information below is about IL_8AF0_002

Detailed Annotation

Isolated cWH basepair

Broad Annotation

No text annotation

Motif group

IL_10892.4

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

62

Unit IDs

9ISV|1|A|U|121
9ISV|1|A|A|122
9ISV|1|A|C|123
*
9ISV|1|A|G|130
9ISV|1|A|U|131
9ISV|1|A|A|132

Current chains

Chain A

RNA (580-MER)

Nearby chains