IL_9J1M_022
3D structure
- PDB id
- 9J1M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- KU13-bond Mycobacterium tuberculosis 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.33 Å
Loop
- Sequence
- GAAGC*GUGAUAGC
- Length
- 13 nucleotides
- Bulged bases
- 9J1M|1|A|G|930, 9J1M|1|A|G|934
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9J1M_022 not in the Motif Atlas
- Geometric match to IL_9DFE_016
- Geometric discrepancy: 0.1145
- The information below is about IL_9DFE_016
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_73855.1
- Basepair signature
- cWW-L-R-L-R-tWH-L-cWW
- Number of instances in this motif group
- 10
Unit IDs
9J1M|1|A|G|803
9J1M|1|A|A|804
9J1M|1|A|A|805
9J1M|1|A|G|806
9J1M|1|A|C|807
*
9J1M|1|A|G|928
9J1M|1|A|U|929
9J1M|1|A|G|930
9J1M|1|A|A|931
9J1M|1|A|U|932
9J1M|1|A|A|933
9J1M|1|A|G|934
9J1M|1|A|C|935
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain E
- Large ribosomal subunit protein uL4
- Chain L
- Large ribosomal subunit protein uL15
Coloring options: