IL_9J1M_027
3D structure
- PDB id
- 9J1M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- KU13-bond Mycobacterium tuberculosis 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.33 Å
Loop
- Sequence
- GGG*CAAUC
- Length
- 8 nucleotides
- Bulged bases
- 9J1M|1|A|G|905, 9J1M|1|A|A|917, 9J1M|1|A|A|918, 9J1M|1|A|U|919
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9J1M_027 not in the Motif Atlas
- Geometric match to IL_9DFE_021
- Geometric discrepancy: 0.0773
- The information below is about IL_9DFE_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_89509.1
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 9
Unit IDs
9J1M|1|A|G|904
9J1M|1|A|G|905
9J1M|1|A|G|906
*
9J1M|1|A|C|916
9J1M|1|A|A|917
9J1M|1|A|A|918
9J1M|1|A|U|919
9J1M|1|A|C|920
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 2
- Large ribosomal subunit protein bL34
- Chain C
- Large ribosomal subunit protein uL2
- Chain E
- Large ribosomal subunit protein uL4
- Chain S
- Large ribosomal subunit protein uL22
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