IL_9J1M_051

3D structure

PDB id

9J1M (explore in PDB, NAKB, or RNA 3D Hub)

Description

KU13-bond Mycobacterium tuberculosis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

GGG*CAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9J1M_051 not in the Motif Atlas

Geometric match to IL_3DIL_006

Geometric discrepancy: 0.1351

The information below is about IL_3DIL_006

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

174

Unit IDs

9J1M|1|A|G|1544
9J1M|1|A|G|1545
9J1M|1|A|G|1546
*
9J1M|1|A|C|1822
9J1M|1|A|A|1823
9J1M|1|A|C|1824

Current chains

Chain A

23S rRNA

Nearby chains