IL_9J1M_057

3D structure

PDB id

9J1M (explore in PDB, NAKB, or RNA 3D Hub)

Description

KU13-bond Mycobacterium tuberculosis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

AG*CACUAAU

Length

9 nucleotides

Bulged bases

9J1M|1|A|U|1746

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9J1M_057 not in the Motif Atlas

Geometric match to IL_9DFE_060

Geometric discrepancy: 0.2856

The information below is about IL_9DFE_060

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_46086.1

Basepair signature

cWW-L-cWW-L-L-R

Number of instances in this motif group

1

Unit IDs

9J1M|1|A|A|1719
9J1M|1|A|G|1720
*
9J1M|1|A|C|1743
9J1M|1|A|A|1744
9J1M|1|A|C|1745
9J1M|1|A|U|1746
9J1M|1|A|A|1747
9J1M|1|A|A|1748
9J1M|1|A|U|1749

Current chains

Chain A

23S rRNA

Nearby chains