IL_9J1M_063
3D structure
- PDB id
- 9J1M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- KU13-bond Mycobacterium tuberculosis 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.33 Å
Loop
- Sequence
- ACUCGG*CUGU
- Length
- 10 nucleotides
- Bulged bases
- 9J1M|1|A|G|2230
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9J1M_063 not in the Motif Atlas
- Geometric match to IL_5J7L_307
- Geometric discrepancy: 0.0664
- The information below is about IL_5J7L_307
- Detailed Annotation
- Intercalated tWH
- Broad Annotation
- Intercalated tWH
- Motif group
- IL_76758.2
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 7
Unit IDs
9J1M|1|A|A|1904
9J1M|1|A|C|1905
9J1M|1|A|U|1906
9J1M|1|A|C|1907
9J1M|1|A|G|1908
9J1M|1|A|G|1909
*
9J1M|1|A|C|2228
9J1M|1|A|U|2229
9J1M|1|A|G|2230
9J1M|1|A|U|2231
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain D
- Large ribosomal subunit protein uL3
- Chain K
- Large ribosomal subunit protein uL14
Coloring options: