IL_9J1M_074

3D structure

PDB id

9J1M (explore in PDB, NAKB, or RNA 3D Hub)

Description

KU13-bond Mycobacterium tuberculosis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

UUAA*UGAAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9J1M_074 not in the Motif Atlas

Geometric match to IL_5J7L_317

Geometric discrepancy: 0.2418

The information below is about IL_5J7L_317

Detailed Annotation

UAA/GAN related

Broad Annotation

No text annotation

Motif group

IL_77691.5

Basepair signature

cWW-tSH-L-R-L-cWW

Number of instances in this motif group

7

Unit IDs

9J1M|1|A|U|2098
9J1M|1|A|U|2099
9J1M|1|A|A|2100
9J1M|1|A|A|2101
*
9J1M|1|A|U|2112
9J1M|1|A|G|2113
9J1M|1|A|A|2114
9J1M|1|A|A|2115
9J1M|1|A|G|2116

Current chains

Chain A

23S rRNA

Nearby chains